Class ShowScatterPlotPopup

java.lang.Object
  |
  +--java.awt.Component
        |
        +--java.awt.Container
              |
              +--java.awt.Window
                    |
                    +--java.awt.Frame
                          |
                          +--ShowScatterPlotPopup

All Implemented Interfaces:

javax.accessibility.Accessible, java.awt.event.ActionListener, java.awt.event.AdjustmentListener, java.util.EventListener, java.io.FilenameFilter, java.awt.image.ImageObserver, java.awt.event.ItemListener, java.awt.MenuContainer, java.awt.event.MouseListener, java.io.Serializable, java.awt.event.WindowListener

public class ShowScatterPlotPopup

extends java.awt.Frame

implements java.awt.event.AdjustmentListener, java.awt.event.ActionListener, java.awt.event.MouseListener, java.awt.event.ItemListener, java.awt.event.WindowListener, java.io.FilenameFilter

Class ShowScatterPlotPopup.java - main popup window containing a scatterplot, pull-down menu, scatterplot scrollers, expression range scrollers, cluster distance scroller, checkboxes, etc as part of the GUI. It includes a variable set of control buttons on the bottom depending on what type of plot is being presented as well as slider controls for the scatterplot. Some of the buttons will popup additional windows to let you specify additional information. There is a popup Status Window that you can hide using the HIDE button that window, and a STATUS button on the main window to pop it up again. This work was produced by Peter Lemkin of the National Cancer Institute, an agency of the United States Government and Djamel Medjahed (SAIC-Frederick). As a work of the United States Government there is no associated copyright. It is offered as open source software under the Mozilla Public License (version 1.1) subject to the limitations noted in the accompanying LEGAL file.

Version:

$Date: 2002/10/14 20:17:17 $ $Revision: $

Author:

P. Lemkin (NCI), Djamel Medjahed (SAIC), NCI-Frederick, Frederick, MD

See Also:

ProtPlot Home

This work was derived from MAExplorer under the Mozilla 1.1 Open Source Public License by Peter Lemkin of the National Cancer Institute, an agency of the United States Government subject to the limitations noted in the accompanying LEGAL file. See licence info on http://maexplorer.sourceforge.org/, Serialized Form

Inner classes inherited from class java.awt.Frame

java.awt.Frame.AccessibleAWTFrame

Inner classes inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow

Inner classes inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Inner classes inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.AWTTreeLock

Field Summary

java.awt.Checkbox	accessGenomicDBCheckBox access genomic DB via the Web if enabled and DB was selected
ShowExprProfilesPopup	clusterSEPP popup scrollable EP list for clustered proteins
java.awt.Color[]	cMap The pseudocolor or grayscale colormap [0:255] for drawing expression data over the range of [0.0 : 1.0].
(package private) java.lang.String	defGifFile default output gif file name
java.awt.Label	distThrLabel "Cluster distance thresh."
java.awt.Scrollbar	distThrSlider Cluster distance threshold slider
java.awt.Label	distThrValueLabel "Cluster distance thresh." value
DrawProtScatterPlot	dwSP Scrollable Scatterplot canvas
java.awt.Color[]	eCmapColor 9 color Colormap for Cmap ratio scale factor color map
float[]	eCMapRatios The 9 ratio values for Cmap ratio scale factor color map
java.awt.Color[]	eColor The 10 pseudocolors[0:9] for drawing non-linear expression mappings using eVap[gray] function.
EventHandlerPRP	eh instance of EventHandlerPRP
float[]	eMap The non-linear mapping (typically exponential) from [0:255] to [0.0 : 1.0].
float[]	eMapMax The 10 highest eMap[] values corresponding to 10 eColor[] values for expression mapping.
java.awt.Checkbox	exprCheckBox Expression/Location selection
java.awt.Label	exprLBLabel "Expression lower limit" or "Ratio lower limit"
java.awt.Label	exprLBValueLabel "Expression lower limit" or "Ratio lower limit" value
java.awt.Scrollbar	expRngLBscr Expression Range vertical (top,bottom) scrollers
java.awt.Scrollbar	expRngUBscr Expression Range vertical (top,bottom) scrollers
java.awt.Panel	exprRangePanel Panel to hold the Expr Range scrollers
java.awt.Label	exprUBLabel "Expression upper limit" or "Ratio upper limit"
java.awt.Label	exprUBValueLabel "Expression upper limit" or "Ratio upper limit" value
Filter	fil Instance of Data Filter.
java.awt.Checkbox	filterCheckBox Filter/Don't-Filter selection [DEPRICAED]
ShowExprProfilesPopup	filterSEPP popup scrollable EP list for filtered proteins
java.awt.Scrollbar	horizLBscr Horizontal (left,right) scrollers for the for canvas
java.awt.Scrollbar	horizUBscr Horizontal (left,right) scrollers for the for canvas
java.awt.Checkbox	logMWscalingCheckBox use Log MW scaling
boolean	logScalingFlag toggle with Linear/Log button
static int	MAX_SCR_SIZE prewired max scroller size
static int	MAX_STEPS_SCR prewired scroller steps
static int	MAX_STEPS_SCR2 prewired scroller steps
private java.awt.MenuBar	mbar menu bar for GUI
(package private) java.awt.Font	menuFont Define the menu fonts
(package private) java.awt.CheckboxMenuItem	miChkBoxAccessGenomicDBs "Access a genomic Web server if you click on a spot [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxAutoUpdateRptMode "Auto-update reports if the state changes [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxClusterDistAVG_ALL_DATA "Use average all data distance metric [RB]
(package private) java.awt.CheckboxMenuItem	miChkBoxClusterDistMAP_LOW_VALUES "Use map low values distance metric [RB]
(package private) java.awt.CheckboxMenuItem	miChkBoxClusterDistWEIGHT "Use weighted distance metric [RB]
(package private) java.awt.CheckboxMenuItem	miChkBoxDisplayXYscatterplot "Display (X vs Y) else (Mw vs pI) scatterplot [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxFilterByExprRange Filter data by expression range [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxFilterByProteinFamily "Filter data by protein families [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxFilterByTissue "Filter data by tissues [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxFilterByXY_KStest "Filter by X & Y sets Kolmogorov-Smirnov-test results [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxFilterByXYmissingProteins "Filter by X & Y sets missing and > N samples [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxFilterByXYtTest "Filter by X & Y sets t-test results [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxGenBankServer "Use GenBank Web server [RB]
(package private) java.awt.CheckboxMenuItem	miChkBoxLogMW "Use log of (MW) [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxMouseOver "Enable mouse-over to see data [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxOutsideRatioRange "Filter by (X/Y) outside of [minRatioVal:maxRatioVal] sliders"
(package private) java.awt.CheckboxMenuItem	miChkBoxPIRProClassServer "Use PIR ProClass Web server [RB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxReqAtLeastNsamples "Filter by requiring at least N samples [RB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxReqAtMostNsamples "Filter by requiring at most N samples [RB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxShowClusteredProteins "Show clustered proteins by black boxes [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxShowExpr "Show expression data else just position [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxShowFilterResults "Show filter results [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxShowXandYsamplesMode "Show both X and Y samples if doing X/Y filtering [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxSortAssendingRptMode "Sort report assending order[CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxSwissProtServer "Use Swiss-Prot Web server [RB] "
(package private) java.awt.CheckboxMenuItem	miChkBoxUseCmapRatioMode "Show samplesX/sampleY ratio range color map [RB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseEPsetExprDataMode "Show current sample expression data [RB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseExprDataMode "Show current sample expression data [RB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseExprPlotMode "Popup Expression Profile plots [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseLocalDoc "Use local documentation else ProtPlot server"
(package private) java.awt.CheckboxMenuItem	miChkBoxUsePseudocolor "Use pseudocolor else grayscale for expression [CB]
(package private) java.awt.CheckboxMenuItem	miChkBoxUseRGratioMode "Show X-samples/Y-sample ratio (Red=X + Green=Y) data [RB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseSavedClusterSet "Filter by AND of Saved Clustered proteins [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseSavedFilterSet "Filter by AND of Saved Filtered proteins [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseTotPRPfiles "Build DB from XXX_tot.prp files else from XXX_under200k.prp files"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseVarRadiusExpr "Use radius proportional to expression else constant [CB]"
(package private) java.awt.CheckboxMenuItem	miChkBoxUseXYSetCmapRatioMode "Show X-Set-samples /X-Set-samples ratio range color map [RB]"
(package private) java.awt.MenuItem	miClustSimilar MenuItem for "Cluster similar proteins to current protein by EP profile"
(package private) java.awt.MenuItem	miEPmissing MenuItem for ""Report EP set statistics of proteins passing missing protein filter"
(package private) java.awt.CheckboxMenuItem	miPrevPlotCB Last Show Plot mode for use in toggling XY set checkbox
(package private) java.awt.MenuItem	miXYmissing MenuItem for "Report X&Y sets statistics of proteins passing missing protein filter"
java.awt.Checkbox	mouseOverCheckBox Show Mouse-over info
java.awt.Label	nbrProteinsLabel "# proteins/sample threshold"
java.awt.Scrollbar	nbrProteinsThrSlider Number of proteins/samples threshold slider
java.awt.Label	nbrProteinsValueLabel "# proteins/sample threshold"
java.awt.Label	nbrSamplesLabel "# samples threshold"
java.awt.Scrollbar	nbrSamplesThrSlider Number of samples threshold slider
java.awt.Label	nbrSamplesValueLabel "# samples threshold" value
int	panelHeight default size - must be set here!
int	panelWidth default size - must be set here!
PopupDialogQuery	pdq hidden popup dialog
PopupFamilyNameSelector	pfns Popup tissue name selector window created when needed
ShowStringPopup	phelp Popup help window
static int	POPUP_HEIGHT Height of main window
static int	POPUP_WIDTH
PopupPRPlistSelector	ppns popup PRP list name selector window created when needed
(package private) static java.lang.String	promptDir last prompted directory for popup dialog
(package private) static java.lang.String	promptExt for FilenameFilter file extension for popup dialog
(package private) static java.lang.String	promptFile last prompted project for popup dialog
private ProtPlot	prp instance of ProtPlot
PopupTissueNameSelector	ptns Popup tissue name selector window created when needed
java.awt.Label	pValueLabel "P-value threshold"
java.awt.Scrollbar	pValueThrSlider pValue threshold slider
java.awt.Label	pValueValueLabel "P-value threshold" value
java.awt.Color[]	rColor [TODO] The 256 pseudocolors[0:255] colors for drawing non-linear ratio mappings using rMap[gray] function where gray is the mapping of ratio (exprX,exprY) to gray.
float[]	rMap [TODO] The non-linear mapping (typically exponential) from [0:255] to [0.01 : 10.0].
(package private) ReportPRP	rpt instance of ReportPRP
(package private) java.awt.Choice	sampleChoice Choice selector for setting sample lists
static int	SEL_CUR_SAMPLE Select current sample
static int	SEL_EP_SAMPLES Select current sample
static int	SEL_X_SAMPLE Select current sample
static int	SEL_Y_SAMPLE Select current sample
java.awt.Panel	sPanel panel which holds scrollable canvas
java.awt.Checkbox	statusCheckBox HideStatus/ShowStatus selection
java.lang.String	title ARG: title of popup plot
java.awt.Label	titleLabel title for the main window
java.awt.Checkbox	useXYsetCheckBox
private UtilPRP	util instance of UtilPRP
java.awt.Scrollbar	vertLBscr vertical (top,bottom) scrollers for the for canvas
java.awt.Scrollbar	vertUBscr vertical (top,bottom) scrollers for the for canvas
static int	VISIBLE_SCR scrollbar's visible amount

Fields inherited from class java.awt.Frame

base, CROSSHAIR_CURSOR, DEFAULT_CURSOR, E_RESIZE_CURSOR, frameSerializedDataVersion, HAND_CURSOR, icon, ICONIFIED, mbManagement, menuBar, MOVE_CURSOR, N_RESIZE_CURSOR, nameCounter, NE_RESIZE_CURSOR, NORMAL, NW_RESIZE_CURSOR, ownedWindows, resizable, S_RESIZE_CURSOR, SE_RESIZE_CURSOR, serialVersionUID, state, SW_RESIZE_CURSOR, TEXT_CURSOR, W_RESIZE_CURSOR, WAIT_CURSOR, weakThis

Fields inherited from class java.awt.Window

active, dbg, focusMgr, inputContext, inputContextLock, OPENED, ownedWindowList, showWithParent, warningString, windowListener, windowSerializedDataVersion

Fields inherited from class java.awt.Container

component, containerListener, containerSerializedDataVersion, dispatcher, layoutMgr, listeningBoundsChildren, listeningChildren, maxSize, ncomponents, printing, printingThreads

Fields inherited from class java.awt.Component

accessibleContext, actionListenerK, adjustmentListenerK, appContext, background, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, changeSupport, componentListener, componentListenerK, componentOrientation, componentSerializedDataVersion, containerListenerK, cursor, dropTarget, enabled, eventMask, focusListener, focusListenerK, font, foreground, graphicsConfig, hasFocus, height, hierarchyBoundsListener, hierarchyBoundsListenerK, hierarchyListener, hierarchyListenerK, incRate, inputMethodListener, inputMethodListenerK, isInc, isPacked, itemListenerK, keyListener, keyListenerK, LEFT_ALIGNMENT, locale, LOCK, metrics, minSize, mouseListener, mouseListenerK, mouseMotionListener, mouseMotionListenerK, name, nameExplicitlySet, newEventsOnly, ownedWindowK, parent, peer, peerFont, popups, prefSize, privateKey, RIGHT_ALIGNMENT, textListenerK, TOP_ALIGNMENT, valid, visible, width, windowClosingException, windowListenerK, x, y

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

ShowScatterPlotPopup(ProtPlot prp, java.lang.String title)
ShowScatterPlotPopup() - constructor

Method Summary

boolean	accept(java.io.File dir, java.lang.String name) accept() - filter used to test if file should be in directory list.
void	actionPerformed(java.awt.event.ActionEvent e) actionPerformed() - Handle Control panel button clicks or menu items.
void	adjustmentValueChanged(java.awt.event.AdjustmentEvent e) adjustmentValueChanged() - handle scroll events.
boolean	changeStateFile(boolean saveModeFlag) changeStateFile() - open up a new state startup database file.
(package private) void	closeAll(boolean saveStateFlag) closeAll() - close all windows
boolean	createPopupPlot(java.lang.String title) createPopupPlot() - create a 2D gel popup scatterplot from raw data.
float	cvNonLinearScroller2StateValue(float ub, float lb, float sbVal, int maxSliderRange) cvNonLinearScroller2StateValue() - convert non-linear Scrollbar value to a State value:
float	cvNonLinearState2ScrollerValue(float ub, float lb, float stVal, int maxSliderRange) cvNonLinearState2ScrollerValue() - convert non-linear State value to a Scroller value:
void	itemStateChanged(java.awt.event.ItemEvent e) itemStateChanged() - handle item state changed events NOTE: need to implement radio groups here since AWT only implements radio groups for Checkboxes, and CheckboxMenuItems.
private java.awt.CheckboxMenuItem	makeChkBoxMenuItem(java.awt.Menu pm, java.lang.String sLabel, java.lang.String sCmd, int shortcut, boolean value) makeChkBoxMenuItem() - make CheckboxMenuItem entry in popup menu list.
private java.awt.Color[]	makeColorMap() makeColorMap() - make 255 gray value colors or if pseudocolor mode, then color range
private java.awt.MenuItem	makeMenuItem(java.awt.Menu pm, java.lang.String sLabel, java.lang.String sCmd, int shortcut) makeMenuItem() - make menuItem entry in menu list.
private java.awt.Menu	makeSubMenu(java.awt.Menu pm, java.lang.String sLabel, java.lang.String sCmd, int shortcut) makeSubMenu() - make submenu entry in menu list.
void	mouseClicked(java.awt.event.MouseEvent e) mouseClicked() - handle mouse Click events
void	mouseDragged(java.awt.event.MouseEvent e) mouseDragged() - handle mouse Drag events
void	mouseEntered(java.awt.event.MouseEvent e) mouseEntered() - handle mouse Enter events
void	mouseExited(java.awt.event.MouseEvent e) mouseExited() - handle mouse Exit events
void	mouseMoved(java.awt.event.MouseEvent e) mouseMoved() - handle mouse Move events
void	mousePressed(java.awt.event.MouseEvent e) mousePressed() - handle mouse Press events
void	mouseReleased(java.awt.event.MouseEvent e) mouseReleased() - handle mouse Release events
boolean	openProteinSetFile(java.lang.String setType) openProteinSetFile() - open up a protein set database file.
void	paint(java.awt.Graphics g) paint() - repaint subwindows
java.lang.String	promptFileName(java.lang.String msg, java.lang.String useDir, java.lang.String initialFile, java.lang.String subDir, java.lang.String fileExt, boolean saveMode, boolean useFileDialog) promptFileName() - dialog prompt for file name.
boolean	saveProteinSetFile(java.lang.String setType) saveProteinSetFile() - open a new protein set database file.
void	saveScatterPlotAsGIF() saveScatterPlotAsGIF() - save the scatterplot as a GIF image file in Report
boolean	setFilterProtSetDiffFromFiles()
boolean	setFilterProtSetIntersectFromFiles()
boolean	setFilterProtSetUnionFromFiles()
boolean	setPlotModeState(java.awt.CheckboxMenuItem itemMCB)
void	setScrollerStateLabelValues() setScrollerStateLabelValues() - set scroller labels to the current state prp.xxxxUB/LB
void	setScrollersToState() setScrollersToState() - reset the scrollers to the current state prp.xxxxUB/LB.
void	setSliderStateEnabled() setSliderStateEnabled() - set the slide enables based on the state [BUG] does not gray out - instead it removes the cursor - not good GUI design
void	updateCurProtein(int mPid) updateCurProtein() - update plot if current protein changed and this type of plot requires it.
private boolean	updatePlot() updatePlot() - update the popup plot
boolean	updateScatterPlot(java.lang.String title) updateScatterPlot() - create a 2D gel popup scatterplot from raw data.
void	updateSlider() updateSlider() - update plot if Slider changed and this type of plot requires it.
void	windowActivated(java.awt.event.WindowEvent e)
void	windowClosed(java.awt.event.WindowEvent e)
void	windowClosing(java.awt.event.WindowEvent e) windowClosing() - close down the window.
void	windowDeactivated(java.awt.event.WindowEvent e)
void	windowDeiconified(java.awt.event.WindowEvent e)
void	windowIconified(java.awt.event.WindowEvent e)
void	windowOpened(java.awt.event.WindowEvent e)

Methods inherited from class java.awt.Frame

, addNotify, addToFrameList, constructComponentName, finalize, getAccessibleContext, getCursorType, getFrames, getIconImage, getMenuBar, getState, getTitle, initIDs, isResizable, paramString, postProcessKeyEvent, readObject, remove, removeFromFrameList, removeNotify, setCursor, setIconImage, setMenuBar, setResizable, setState, setTitle, writeObject

Methods inherited from class java.awt.Window

addOwnedWindow, addWindowListener, adjustListeningChildren, applyResourceBundle, applyResourceBundle, connectOwnedWindow, dispatchEventImpl, dispose, eventEnabled, getFocusOwner, getGraphicsConfiguration, getInputContext, getListeners, getLocale, getOwnedWindows, getOwner, getToolkit, getWarningString, hide, isActive, isShowing, nextFocus, ownedInit, pack, postEvent, postWindowEvent, preProcessKeyEvent, processEvent, processWindowEvent, removeOwnedWindow, removeWindowListener, resetGC, setCursor, setFocusOwner, setWarningString, show, toBack, toFront, transferFocus

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, applyOrientation, checkGD, countComponents, createChildHierarchyEvents, createHierarchyEvents, deliverEvent, dispatchEventToSelf, doLayout, findComponentAt, findComponentAt, findComponentAt, getAccessibleAt, getAccessibleChild, getAccessibleChildrenCount, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents_NoClientCode, getComponents, getInsets, getLayout, getMaximumSize, getMinimumSize, getMouseEventTarget, getPreferredSize, getWindow, insets, invalidate, invalidateTree, isAncestorOf, layout, lightweightPaint, lightweightPrint, list, list, locate, minimumSize, numListening, paintComponents, paintHeavyweightComponents, postsOldMouseEvents, preferredSize, print, printComponents, printHeavyweightComponents, processContainerEvent, proxyEnableEvents, proxyRequestFocus, remove, remove, removeAll, removeContainerListener, setFont, setLayout, update, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addPropertyChangeListener, addPropertyChangeListener, areInputMethodsEnabled, bounds, checkImage, checkImage, checkWindowClosingException, coalesceEvents, contains, contains, createImage, createImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, getAccessibleIndexInParent, getAccessibleStateSet, getBackground, getBounds, getBounds, getColorModel, getComponentOrientation, getCursor, getDropTarget, getFont_NoClientCode, getFont, getFontMetrics, getForeground, getGraphics, getHeight, getInputMethodRequests, getLocation, getLocation, getLocationOnScreen_NoTreeLock, getLocationOnScreen, getName, getNativeContainer, getParent_NoClientCode, getParent, getPeer, getSize, getSize, getToolkitImpl, getTreeLock, getWidth, getWindowForObject, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isDisplayable, isDoubleBuffered, isEnabled, isEnabledImpl, isFocusTraversable, isLightweight, isOpaque, isRecursivelyVisible, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, reshape, resize, resize, setBackground, setBounds, setBounds, setComponentOrientation, setDropTarget, setEnabled, setForeground, setLocale, setLocation, setLocation, setName, setSize, setSize, setVisible, show, size, toString, transferFocus

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, registerNatives, wait, wait, wait

Methods inherited from interface java.awt.MenuContainer

getFont, postEvent

Field Detail

prp

private ProtPlot prp

instance of ProtPlot

eh

public EventHandlerPRP eh

instance of EventHandlerPRP

fil

public Filter fil

Instance of Data Filter.

rpt

ReportPRP rpt

instance of ReportPRP

util

private UtilPRP util

instance of UtilPRP

POPUP_WIDTH

public static final int POPUP_WIDTH

POPUP_HEIGHT

public static final int POPUP_HEIGHT

Height of main window

SEL_CUR_SAMPLE

public static final int SEL_CUR_SAMPLE

Select current sample

SEL_X_SAMPLE

public static final int SEL_X_SAMPLE

Select current sample

SEL_Y_SAMPLE

public static final int SEL_Y_SAMPLE

Select current sample

SEL_EP_SAMPLES

public static final int SEL_EP_SAMPLES

Select current sample

MAX_STEPS_SCR

public static final int MAX_STEPS_SCR

prewired scroller steps

MAX_STEPS_SCR2

public static final int MAX_STEPS_SCR2

prewired scroller steps

VISIBLE_SCR

public static final int VISIBLE_SCR

scrollbar's visible amount

MAX_SCR_SIZE

public static final int MAX_SCR_SIZE

prewired max scroller size

title

public java.lang.String title

ARG: title of popup plot

panelWidth

public int panelWidth

default size - must be set here!

panelHeight

public int panelHeight

default size - must be set here!

mbar

private java.awt.MenuBar mbar

menu bar for GUI

menuFont

java.awt.Font menuFont

Define the menu fonts

sPanel

public java.awt.Panel sPanel

panel which holds scrollable canvas

pValueThrSlider

public java.awt.Scrollbar pValueThrSlider

pValue threshold slider

distThrSlider

public java.awt.Scrollbar distThrSlider

Cluster distance threshold slider

nbrSamplesThrSlider

public java.awt.Scrollbar nbrSamplesThrSlider

Number of samples threshold slider

nbrProteinsThrSlider

public java.awt.Scrollbar nbrProteinsThrSlider

Number of proteins/samples threshold slider

vertLBscr

public java.awt.Scrollbar vertLBscr

vertical (top,bottom) scrollers for the for canvas

vertUBscr

public java.awt.Scrollbar vertUBscr

vertical (top,bottom) scrollers for the for canvas

horizLBscr

public java.awt.Scrollbar horizLBscr

Horizontal (left,right) scrollers for the for canvas

horizUBscr

public java.awt.Scrollbar horizUBscr

Horizontal (left,right) scrollers for the for canvas

exprRangePanel

public java.awt.Panel exprRangePanel

Panel to hold the Expr Range scrollers

expRngLBscr

public java.awt.Scrollbar expRngLBscr

Expression Range vertical (top,bottom) scrollers

expRngUBscr

public java.awt.Scrollbar expRngUBscr

Expression Range vertical (top,bottom) scrollers

exprUBLabel

public java.awt.Label exprUBLabel

"Expression upper limit" or "Ratio upper limit"

exprLBLabel

public java.awt.Label exprLBLabel

"Expression lower limit" or "Ratio lower limit"

distThrLabel

public java.awt.Label distThrLabel

"Cluster distance thresh."

nbrSamplesLabel

public java.awt.Label nbrSamplesLabel

"# samples threshold"

nbrProteinsLabel

public java.awt.Label nbrProteinsLabel

"# proteins/sample threshold"

pValueLabel

public java.awt.Label pValueLabel

"P-value threshold"

exprUBValueLabel

public java.awt.Label exprUBValueLabel

"Expression upper limit" or "Ratio upper limit" value

exprLBValueLabel

public java.awt.Label exprLBValueLabel

"Expression lower limit" or "Ratio lower limit" value

distThrValueLabel

public java.awt.Label distThrValueLabel

"Cluster distance thresh." value

nbrSamplesValueLabel

public java.awt.Label nbrSamplesValueLabel

"# samples threshold" value

nbrProteinsValueLabel

public java.awt.Label nbrProteinsValueLabel

"# proteins/sample threshold"

pValueValueLabel

public java.awt.Label pValueValueLabel

"P-value threshold" value

sampleChoice

java.awt.Choice sampleChoice

Choice selector for setting sample lists

statusCheckBox

public java.awt.Checkbox statusCheckBox

HideStatus/ShowStatus selection

exprCheckBox

public java.awt.Checkbox exprCheckBox

Expression/Location selection

filterCheckBox

public java.awt.Checkbox filterCheckBox

Filter/Don't-Filter selection [DEPRICAED]

useXYsetCheckBox

public java.awt.Checkbox useXYsetCheckBox

mouseOverCheckBox

public java.awt.Checkbox mouseOverCheckBox

Show Mouse-over info

logMWscalingCheckBox

public java.awt.Checkbox logMWscalingCheckBox

use Log MW scaling

accessGenomicDBCheckBox

public java.awt.Checkbox accessGenomicDBCheckBox

access genomic DB via the Web if enabled and DB was selected

miXYmissing

java.awt.MenuItem miXYmissing

MenuItem for "Report X&Y sets statistics of proteins passing missing protein filter"

miEPmissing

java.awt.MenuItem miEPmissing

MenuItem for ""Report EP set statistics of proteins passing missing protein filter"

miClustSimilar

java.awt.MenuItem miClustSimilar

MenuItem for "Cluster similar proteins to current protein by EP profile"

miChkBoxFilterByProteinFamily

java.awt.CheckboxMenuItem miChkBoxFilterByProteinFamily

"Filter data by protein families [CB]"

miChkBoxFilterByTissue

java.awt.CheckboxMenuItem miChkBoxFilterByTissue

"Filter data by tissues [CB]"

miChkBoxFilterByExprRange

java.awt.CheckboxMenuItem miChkBoxFilterByExprRange

Filter data by expression range [CB]"

miChkBoxShowXandYsamplesMode

java.awt.CheckboxMenuItem miChkBoxShowXandYsamplesMode

"Show both X and Y samples if doing X/Y filtering [CB]"

miChkBoxAutoUpdateRptMode

java.awt.CheckboxMenuItem miChkBoxAutoUpdateRptMode

"Auto-update reports if the state changes [CB]"

miChkBoxSortAssendingRptMode

java.awt.CheckboxMenuItem miChkBoxSortAssendingRptMode

"Sort report assending order[CB]"

miPrevPlotCB

java.awt.CheckboxMenuItem miPrevPlotCB

Last Show Plot mode for use in toggling XY set checkbox

miChkBoxReqAtLeastNsamples

java.awt.CheckboxMenuItem miChkBoxReqAtLeastNsamples

"Filter by requiring at least N samples [RB]"

miChkBoxReqAtMostNsamples

java.awt.CheckboxMenuItem miChkBoxReqAtMostNsamples

"Filter by requiring at most N samples [RB]"

miChkBoxUseSavedClusterSet

java.awt.CheckboxMenuItem miChkBoxUseSavedClusterSet

"Filter by AND of Saved Clustered proteins [CB]"

miChkBoxUseSavedFilterSet

java.awt.CheckboxMenuItem miChkBoxUseSavedFilterSet

"Filter by AND of Saved Filtered proteins [CB]"

miChkBoxFilterByXYmissingProteins

java.awt.CheckboxMenuItem miChkBoxFilterByXYmissingProteins

"Filter by X & Y sets missing and > N samples [CB]"

miChkBoxFilterByXYtTest

java.awt.CheckboxMenuItem miChkBoxFilterByXYtTest

"Filter by X & Y sets t-test results [CB]"

miChkBoxFilterByXY_KStest

java.awt.CheckboxMenuItem miChkBoxFilterByXY_KStest

"Filter by X & Y sets Kolmogorov-Smirnov-test results [CB]"

miChkBoxUsePseudocolor

java.awt.CheckboxMenuItem miChkBoxUsePseudocolor

"Use pseudocolor else grayscale for expression [CB]

miChkBoxShowFilterResults

java.awt.CheckboxMenuItem miChkBoxShowFilterResults

"Show filter results [CB]"

miChkBoxLogMW

java.awt.CheckboxMenuItem miChkBoxLogMW

"Use log of (MW) [CB]"

miChkBoxMouseOver

java.awt.CheckboxMenuItem miChkBoxMouseOver

"Enable mouse-over to see data [CB]"

miChkBoxShowExpr

java.awt.CheckboxMenuItem miChkBoxShowExpr

"Show expression data else just position [CB]"

miChkBoxUseVarRadiusExpr

java.awt.CheckboxMenuItem miChkBoxUseVarRadiusExpr

"Use radius proportional to expression else constant [CB]"

miChkBoxShowClusteredProteins

java.awt.CheckboxMenuItem miChkBoxShowClusteredProteins

"Show clustered proteins by black boxes [CB]"

miChkBoxAccessGenomicDBs

java.awt.CheckboxMenuItem miChkBoxAccessGenomicDBs

"Access a genomic Web server if you click on a spot [CB]"

miChkBoxSwissProtServer

java.awt.CheckboxMenuItem miChkBoxSwissProtServer

"Use Swiss-Prot Web server [RB] "

miChkBoxPIRProClassServer

java.awt.CheckboxMenuItem miChkBoxPIRProClassServer

"Use PIR ProClass Web server [RB]"

miChkBoxGenBankServer

java.awt.CheckboxMenuItem miChkBoxGenBankServer

"Use GenBank Web server [RB]

miChkBoxClusterDistWEIGHT

java.awt.CheckboxMenuItem miChkBoxClusterDistWEIGHT

"Use weighted distance metric [RB]

miChkBoxClusterDistAVG_ALL_DATA

java.awt.CheckboxMenuItem miChkBoxClusterDistAVG_ALL_DATA

"Use average all data distance metric [RB]

miChkBoxClusterDistMAP_LOW_VALUES

java.awt.CheckboxMenuItem miChkBoxClusterDistMAP_LOW_VALUES

"Use map low values distance metric [RB]

miChkBoxUseTotPRPfiles

java.awt.CheckboxMenuItem miChkBoxUseTotPRPfiles

"Build DB from XXX_tot.prp files else from XXX_under200k.prp files"

miChkBoxUseExprDataMode

java.awt.CheckboxMenuItem miChkBoxUseExprDataMode

"Show current sample expression data [RB]"

miChkBoxUseEPsetExprDataMode

java.awt.CheckboxMenuItem miChkBoxUseEPsetExprDataMode

"Show current sample expression data [RB]"

miChkBoxUseRGratioMode

java.awt.CheckboxMenuItem miChkBoxUseRGratioMode

"Show X-samples/Y-sample ratio (Red=X + Green=Y) data [RB]"

miChkBoxUseCmapRatioMode

java.awt.CheckboxMenuItem miChkBoxUseCmapRatioMode

"Show samplesX/sampleY ratio range color map [RB]"

miChkBoxUseXYSetCmapRatioMode

java.awt.CheckboxMenuItem miChkBoxUseXYSetCmapRatioMode

"Show X-Set-samples /X-Set-samples ratio range color map [RB]"

miChkBoxDisplayXYscatterplot

java.awt.CheckboxMenuItem miChkBoxDisplayXYscatterplot

"Display (X vs Y) else (Mw vs pI) scatterplot [CB]"

miChkBoxOutsideRatioRange

java.awt.CheckboxMenuItem miChkBoxOutsideRatioRange

"Filter by (X/Y) outside of [minRatioVal:maxRatioVal] sliders"

miChkBoxUseExprPlotMode

java.awt.CheckboxMenuItem miChkBoxUseExprPlotMode

"Popup Expression Profile plots [CB]"

miChkBoxUseLocalDoc

java.awt.CheckboxMenuItem miChkBoxUseLocalDoc

"Use local documentation else ProtPlot server"

logScalingFlag

public boolean logScalingFlag

toggle with Linear/Log button

titleLabel

public java.awt.Label titleLabel

title for the main window

cMap

public java.awt.Color[] cMap

The pseudocolor or grayscale colormap [0:255] for drawing expression data over the range of [0.0 : 1.0]. Setup in makeColormap().

eColor

public java.awt.Color[] eColor

The 10 pseudocolors[0:9] for drawing non-linear expression mappings using eVap[gray] function. Setup in makeColormap().

eMap

public float[] eMap

The non-linear mapping (typically exponential) from [0:255] to [0.0 : 1.0]. Setup in makeColormap() for expresion mapping.

eMapMax

public float[] eMapMax

The 10 highest eMap[] values corresponding to 10 eColor[] values for expression mapping.

eCmapColor

public java.awt.Color[] eCmapColor

9 color Colormap for Cmap ratio scale factor color map

eCMapRatios

public float[] eCMapRatios

The 9 ratio values for Cmap ratio scale factor color map

rColor

public java.awt.Color[] rColor

[TODO] The 256 pseudocolors[0:255] colors for drawing non-linear ratio mappings using rMap[gray] function where gray is the mapping of ratio (exprX,exprY) to gray. Setup in makeColormap().

rMap

public float[] rMap

[TODO] The non-linear mapping (typically exponential) from [0:255] to [0.01 : 10.0]. Setup in makeColormap() for ratio mapping. We then scale this to the actual ratio range [minRatioSample : maxRatioSample].

ppns

public PopupPRPlistSelector ppns

popup PRP list name selector window created when needed

pfns

public PopupFamilyNameSelector pfns

Popup tissue name selector window created when needed

ptns

public PopupTissueNameSelector ptns

Popup tissue name selector window created when needed

phelp

public ShowStringPopup phelp

Popup help window

filterSEPP

public ShowExprProfilesPopup filterSEPP

popup scrollable EP list for filtered proteins

clusterSEPP

public ShowExprProfilesPopup clusterSEPP

popup scrollable EP list for clustered proteins

defGifFile

java.lang.String defGifFile

default output gif file name

dwSP

public DrawProtScatterPlot dwSP

Scrollable Scatterplot canvas

promptDir

static java.lang.String promptDir

last prompted directory for popup dialog

promptFile

static java.lang.String promptFile

last prompted project for popup dialog

promptExt

static java.lang.String promptExt

for FilenameFilter file extension for popup dialog

pdq

public PopupDialogQuery pdq

hidden popup dialog

Constructor Detail

ShowScatterPlotPopup

public ShowScatterPlotPopup(ProtPlot prp,
                            java.lang.String title)

ShowScatterPlotPopup() - constructor

Parameters:

prp - is instance of ProtPlot

title - of plot

Method Detail

createPopupPlot

public boolean createPopupPlot(java.lang.String title)

createPopupPlot() - create a 2D gel popup scatterplot from raw data.

Returns:

false if there is problem.

setSliderStateEnabled

public void setSliderStateEnabled()

setSliderStateEnabled() - set the slide enables based on the state [BUG] does not gray out - instead it removes the cursor - not good GUI design

updateScatterPlot

public boolean updateScatterPlot(java.lang.String title)

updateScatterPlot() - create a 2D gel popup scatterplot from raw data.

Returns:

false if there is problem.

paint

public void paint(java.awt.Graphics g)

paint() - repaint subwindows

Overrides:

paint in class java.awt.Container

makeMenuItem

private java.awt.MenuItem makeMenuItem(java.awt.Menu pm,
                                       java.lang.String sLabel,
                                       java.lang.String sCmd,
                                       int shortcut)

makeMenuItem() - make menuItem entry in menu list. Setup action command and listener call back. If the command name is null, set the command name to label name. if shortCut is <0, then gray-out the item. i.e. not available and do not add to event handler.

Parameters:

pm - is the menu to install it

sLabel - is the visible label

sCmd - is the opt Cmd name (uses sLabel if null)

shortcut - is the opt short cut

Returns:

the MenuItem

makeSubMenu

private java.awt.Menu makeSubMenu(java.awt.Menu pm,
                                  java.lang.String sLabel,
                                  java.lang.String sCmd,
                                  int shortcut)

makeSubMenu() - make submenu entry in menu list. Setup action command and listener call back. If the command name is null, set the command name to label name.

Parameters:

pm - is the menu to install it

sLabel - is the visible label

sCmd - is the opt Cmd name (uses sLabel if null)

shortcut - is the opt short cut

makeChkBoxMenuItem

private java.awt.CheckboxMenuItem makeChkBoxMenuItem(java.awt.Menu pm,
                                                     java.lang.String sLabel,
                                                     java.lang.String sCmd,
                                                     int shortcut,
                                                     boolean value)

makeChkBoxMenuItem() - make CheckboxMenuItem entry in popup menu list. Setup action command and listener call back. If the command name is null, set the command name to label name. if shortCut is <0, then gray-out the item. i.e. not available and do not add to event handler.

Parameters:

pm - is the menu to install it

sLabel - is the visible label

sCmd - is the opt Cmd name (uses sLabel if null)

shortcut - is the opt short cut

value - is the initial value of the checkbox

makeColorMap

private java.awt.Color[] makeColorMap()

makeColorMap() - make 255 gray value colors or if pseudocolor mode, then color range

Returns:

colormap

updatePlot

private boolean updatePlot()

updatePlot() - update the popup plot

Returns:

false if there is problem.

closeAll

void closeAll(boolean saveStateFlag)

closeAll() - close all windows

Parameters:

saveStateFlag - first before quiting

setFilterProtSetIntersectFromFiles

public boolean setFilterProtSetIntersectFromFiles()

setFilterProtSetUnionFromFiles

public boolean setFilterProtSetUnionFromFiles()

setFilterProtSetDiffFromFiles

public boolean setFilterProtSetDiffFromFiles()

saveProteinSetFile

public boolean saveProteinSetFile(java.lang.String setType)

saveProteinSetFile() - open a new protein set database file.

Parameters:

setType - is either "Cluster" or "Filter" set to update.

Returns:

true if succeed

openProteinSetFile

public boolean openProteinSetFile(java.lang.String setType)

openProteinSetFile() - open up a protein set database file.

Parameters:

setType - is either "Cluster" or "Filter" set to update.

Returns:

true if succeed

changeStateFile

public boolean changeStateFile(boolean saveModeFlag)

changeStateFile() - open up a new state startup database file.

Parameters:

saveModeFlag - is true if doing a 'save file' else 'open file'

Returns:

the full path of the new state startu file, null if failed

accept

public boolean accept(java.io.File dir,
                      java.lang.String name)

accept() - filter used to test if file should be in directory list. NOTE: implements method for io.FilenameFilter.accept() Checks if the file extension is promptExt

Specified by:

accept in interface java.io.FilenameFilter

Parameters:

dir - is the file directory

name - is the name of the file

Returns:

true if accept it

promptFileName

public java.lang.String promptFileName(java.lang.String msg,
                                       java.lang.String useDir,
                                       java.lang.String initialFile,
                                       java.lang.String subDir,
                                       java.lang.String fileExt,
                                       boolean saveMode,
                                       boolean useFileDialog)

promptFileName() - dialog prompt for file name. If useFileDialog is set use FileDialog else dialogQuery. Set promptFile, and promptDir.

Parameters:

msg - is the prompt msg

useDir - is the opt. dir to use

initialFile - is the opt. initial file

subDir - is theopt. subdir to use

fileExt - is the file extension

saveMode - is the mode. Save if true else open

useFileDialog - if true else query dialog

Returns:

the file name.

See Also:

PopupDialogQuery.dialogQuery(java.lang.String, int)

saveScatterPlotAsGIF

public void saveScatterPlotAsGIF()

saveScatterPlotAsGIF() - save the scatterplot as a GIF image file in Report

cvNonLinearState2ScrollerValue

public float cvNonLinearState2ScrollerValue(float ub,
                                            float lb,
                                            float stVal,
                                            int maxSliderRange)

cvNonLinearState2ScrollerValue() - convert non-linear State value to a Scroller value:

      ubMlbRange= (ub-lb),
      stMlbVal= (sbMax -stVal -lb),
      r= (stMlbVal / ubMlbRange),
      rLog= r*log(sbMax+1.0),
      sbVal= sbMax - (exp(rLog) - 1.0).

Parameters:

ub - - upper bound of the state

lb - - upper bound of the state

stVal - - upper bound of the state

maxSliderRange - - # of steps in slider

Returns:

sbVal - computed as above, -1.0F if failed

cvNonLinearScroller2StateValue

public float cvNonLinearScroller2StateValue(float ub,
                                            float lb,
                                            float sbVal,
                                            int maxSliderRange)

cvNonLinearScroller2StateValue() - convert non-linear Scrollbar value to a State value:

 If using a log scale, then
        stVal = alpha*(sbValue**2)+beta,
 where: alpha = (ub-lb)/(sbSize**2-1),
        beta  = ( (ub+lb)-alpha*(sbSize**2+1) )/2.

Parameters:

ub - - upper bound of the state

lb - - upper bound of the state

sbVal - - upper bound of the state

maxSliderRange - - # of steps in slider

Returns:

stVal - computed as above, -1.0F if failed

setScrollersToState

public void setScrollersToState()

setScrollersToState() - reset the scrollers to the current state prp.xxxxUB/LB. If using a log scale, then to convert a State value to a non-linear Scroller value.

setScrollerStateLabelValues

public void setScrollerStateLabelValues()

setScrollerStateLabelValues() - set scroller labels to the current state prp.xxxxUB/LB

setPlotModeState

public boolean setPlotModeState(java.awt.CheckboxMenuItem itemMCB)

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent e)

actionPerformed() - Handle Control panel button clicks or menu items.

Specified by:

actionPerformed in interface java.awt.event.ActionListener

Parameters:

e - is action event

adjustmentValueChanged

public void adjustmentValueChanged(java.awt.event.AdjustmentEvent e)

adjustmentValueChanged() - handle scroll events. Use the scroll values to select the part of the plot to be displayed and then repaint it.

Specified by:

adjustmentValueChanged in interface java.awt.event.AdjustmentListener

Parameters:

e - is AdjustmentEvent

itemStateChanged

public void itemStateChanged(java.awt.event.ItemEvent e)

itemStateChanged() - handle item state changed events NOTE: need to implement radio groups here since AWT only implements radio groups for Checkboxes, and CheckboxMenuItems.

Specified by:

itemStateChanged in interface java.awt.event.ItemListener

Parameters:

e - is ItemEvent

mousePressed

public void mousePressed(java.awt.event.MouseEvent e)

mousePressed() - handle mouse Press events

Specified by:

mousePressed in interface java.awt.event.MouseListener

mouseReleased

public void mouseReleased(java.awt.event.MouseEvent e)

mouseReleased() - handle mouse Release events

Specified by:

mouseReleased in interface java.awt.event.MouseListener

mouseClicked

public void mouseClicked(java.awt.event.MouseEvent e)

mouseClicked() - handle mouse Click events

Specified by:

mouseClicked in interface java.awt.event.MouseListener

mouseMoved

public void mouseMoved(java.awt.event.MouseEvent e)

mouseMoved() - handle mouse Move events

mouseDragged

public void mouseDragged(java.awt.event.MouseEvent e)

mouseDragged() - handle mouse Drag events

mouseEntered

public void mouseEntered(java.awt.event.MouseEvent e)

mouseEntered() - handle mouse Enter events

Specified by:

mouseEntered in interface java.awt.event.MouseListener

mouseExited

public void mouseExited(java.awt.event.MouseEvent e)

mouseExited() - handle mouse Exit events

Specified by:

mouseExited in interface java.awt.event.MouseListener

updateCurProtein

public void updateCurProtein(int mPid)

updateCurProtein() - update plot if current protein changed and this type of plot requires it.

Parameters:

mPid - is master protein id

updateSlider

public void updateSlider()

updateSlider() - update plot if Slider changed and this type of plot requires it.

windowClosing

public void windowClosing(java.awt.event.WindowEvent e)

windowClosing() - close down the window.

Specified by:

windowClosing in interface java.awt.event.WindowListener

windowOpened

public void windowOpened(java.awt.event.WindowEvent e)

Specified by:

windowOpened in interface java.awt.event.WindowListener

windowClosed

public void windowClosed(java.awt.event.WindowEvent e)

Specified by:

windowClosed in interface java.awt.event.WindowListener

windowActivated

public void windowActivated(java.awt.event.WindowEvent e)

Specified by:

windowActivated in interface java.awt.event.WindowListener

windowDeactivated

public void windowDeactivated(java.awt.event.WindowEvent e)

Specified by:

windowDeactivated in interface java.awt.event.WindowListener

windowDeiconified

public void windowDeiconified(java.awt.event.WindowEvent e)

Specified by:

windowDeiconified in interface java.awt.event.WindowListener

windowIconified

public void windowIconified(java.awt.event.WindowEvent e)

Specified by:

windowIconified in interface java.awt.event.WindowListener